Pristupačnost
Convergence in Amino Acid Outsourcing Between Animals and Predatory Bacteria
Bacterial Amino Acid Auxotrophies Enable Energetically Costlier Proteomes
Developmental phylotranscriptomics in grapevine suggests an ancestral role of somatic embryogenesis
DNA sequence simulation based on Gillespie algorithm
Efficient algorithm for finding maximum-likelihood phylogeny trees
Macroevolutionary dynamics of gene family gain and loss along multicellular eukaryotic lineages
Deep-learning based DNA sequence classification
Deep-learning based scRNA-seq cell type identification
Identification of bacterial antibiotic resistance genes
Detection of Parkinson's disease based on biomedical voice measurements
Machine learning based analysis of diabetes datasets
Diabetes prediction using metagenomic datasets
Deep learning-based protein sequence clustering
Evolutionary origins of the N-glycosylation from the perspective of Homo sapiens genome
Implementation of the efficient enhanced suffix-array construction algorithm
Phylogenetic tree construction and visualization
Hybrid referential genome compression
Using MR images for brain tumor detection
Pleomorphic Variants of Borreliella (syn. Borrelia) burgdorferi Express Evolutionary Distinct Transcriptomes
FM-index based long reads error correction
Prediction of classical music composers based on audio pieces stored in MIDI format
Urinary biomarkers for detection of pancreatic cancer
Protein sequence clustering in the context of gene family evolution
Deep learning-based pairwise alignment of protein sequences
Deep learning-based detection of viral subtypes
Parametrized selection of related protein sequences required for the estimation of gene age
Automated CT-MRI image fusion for surgical planning
A novel time-lapse imaging method for studying developing bacterial biofilms
Predicting the progression of HIV infection based on viral RNA sequences
Evolutionary origins of the N-glycosylation from the perspective of Homo sapiens genome
Application of machine learning methods to genome-wide prediction of enhancers
Referential genome compression
Malignant tumor detection in microscopic images of tumor tissue
Machine learning methods for soil microbiome prediction
Genome alignment based on hidden Markov model
Determining advertisement relevancy based on user's search query
Application of machine learning methods to genome-wide prediction of enhancers
Cuckoo filter improvements
Embryo-like features in developing Bacillus subtilis biofilms
Detecting arrhythmia in ECG recordings using recurrent neural network
Detection of spoofing attacks on the facial recognition system
Application of machine learning for detecting gut microbiota composition in persons with autism spectrum disorder
Efficient referential genome compression
Application of machine learning for predicting the age of a child from X-ray hand images
Application of classification methods for predicting the admission of COVID-19 patients to intensive care unit
Transcriptome profiling of Borrelia burgdorferi pleomorphic variants
Application of classification methods for predicting a possible heart failure
Referential compression of genomic data sets
Protein clustering using k-means algorithm
Protein clustering using MCL algorithm
Implementation of the efficient suffix array construction algorithm
Phylogeny-Ontogeny Correlations: Lessons From Microbial Biofilms
Referential genome compression
Clustering methods for genetic recombination detection
Machine learning approach to estimation of drug consumption risk
Protein-protein interaction prediction using convolutional neural network
Extended dynamic cuckoo filter
Machine learning approach to estimation of drug consumption risk
Phylogeny-ontogeny correlations in Bacillus subtilis biofilms
Application of k-means clustering algorithm to gene clustering
Application of Networks in Epidemiology
Phylogenetic Tree Construction
Clustering methods for genetic recombination detection
Protein-protein interaction prediction using convolutional neural network
Extended dynamic cuckoo filter
FM-tree
Protein Structure Visualization
Modelling spatial development of biological systems
Network Traversal Algorithms
Image classification for skin cancer detection
Memory-efficient genotype storage
Blood Cell Image Classification for Leukemia Detection
Artificial intelligence alignment using debate
Macroevolutionary reconstruction of glycosylation from the perspective of homo sapiens genome
Cancer Classification using Gene Expression
Correspondence analysis applied to large scale Evo-Devo data
FM-index
Application of machine learning to predicting cancer drug response
Phylogenetic Tree Construction using Maximum Parsimony and Maximum Likelihood
Metagenomics-based disease prediction
Dynamic FM-index
Methods for the longest common prefix array construction
Compressed Suffix Arrays
Application of machine learning in metagenomics
Distance-Based Phylogenetic Tree Construction Methods
Image-Based Phylogenetic Classification
Software for Comparing Eukaryotic Genomes
Single Nucleotide Polymorphism Detection
Protein Secondary Structure Prediction
Algorithm for Paging Large-Scale Genome Database
Implementing Suffix-Array Construction Algorithms Scalable to Mammalian Genomes
Application of Hidden Markov Models for Searching Nucleotide Sequences
Wavelet Tree Construction of Genome and Protein Sequences
Hybrid de novo genome assembly
Finding overlapping reads for de novo genome assembly
gmos: Rapid Detection of Genome Mosaicism over Short Evolutionary Distances
The Lempel-Ziv self-index with an application to genome analysis
Memory-Efficient Storage of Multiple Genomes of the Same Species
Alignment-free detection of horizontal gene transfer between closely related bacterial genomes
Alignment-free detection of local similarity among viral and bacterial genomes
Algorithms for Efficient Alignment-Free Sequence Comparison
Efficient Estimation of Pairwise Distances between Genomes
Estimating Mutation Distances from Unaligned Genomes
An Alignment-Free Distance Measure for Closely Related Genomes
Comparison of Data Mining Techniques Applied to Biological Data
Data Warehouse as a Part of the Higher Education Information System in Croatia
ISVU - Higher Education Information System
University Undergraduate Study Warehouse
Teaching
University undergraduate
- Algorithms and Data Structures (Lecturer in charge)
- Algorithms and Data Structures (Lecturer in charge)
- Bioinformatics 1 (Lecturer in charge, Lecturer in charge, Lecturer in charge)
- Bioinformatics 1 (Lecturer in charge, Lecturer in charge)
- BSc Thesis (Lecturers)
- Final BSc Thesis (Lecturers)
- Project C (Lecturers)
- Software Design Project (Lecturers)
- Software Design Project (Lecturers)
University graduate
- Bioinformatics 2 (Lecturer in charge)
- Bioinformatics 2 (Lecturer in charge)
- Diploma thesis (Lecturers)
- Graduation Thesis (Lecturers)
- Graduation Thesis (Lecturers)
- Project (Lecturers)
- Project (Lecturers)
- Project (Lecturers)
- Project (Lecturers)
- Seminar 1 (Lecturers)
- Seminar 2 (Lecturers)
Postgraduate doctoral study programme
- Algorithms in bioinformatics (Lecturer in charge)
Competences
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Engineering in medicine and biology
Bioinformatics Computational biology -
Mathematics
Algorithm design and anlaysis Algorithms -
Computational and artificial intelligence
Machine learning