dr. sc. Jelena Božek

Researcher, Department of Wireless Communications

Location:
Public phone number:
6129-567
Internal phone number:
567
  Editor's books
 

1. Proceedings ELMAR-2013 : 55th International Symposium ELMAR-2013 / Božek, Jelena; Grgić, Mislav; Zovko-Cihlar, Branka, editor(s).
Zagreb : ELMAR, 2013 (proceedings).

2. Proceedings ELMAR-2012 : 54th International Symposium ELMAR-2012 / Božek, Jelena; Grgić, Mislav, editor(s).
Zagreb : ELMAR, 2012 (proceedings).

3. Proceedings ELMAR-2011 : 53rd International Symposium ELMAR-2011 / Božek, Jelena; Grgić, Mislav, editor(s).
Zagreb : ELMAR, 2011 (proceedings).

4. Proceedings ELMAR-2010 : 52nd International Symposium ELMAR-2010 / Grgić, Mislav; Božek, Jelena; Grgić, Sonja, editor(s).
Zagreb : ELMAR, 2010 (proceedings).

5. Proceedings ELMAR-2009 : 51st International Symposium ELMAR-2009 / Grgić, Mislav; Božek, Jelena; Grgić, Sonja, editor(s).
Zagreb : ELMAR, 2009 (proceedings).
 
  Book chapters
 

1. Božek, Jelena; Muštra, Mario; Delač, Krešimir; Grgić, Mislav.
A Survey of Image Processing Algorithms in Digital Mammography // Recent Advances in Multimedia Signal Processing and Communications / Grgić, Mislav ; Delač, Krešimir ; Ghanbari, Mohammed, editor(s).
Heidelberg : Springer-Verlag, 2009. Str. 631-657.
 
  Journal articles and review articles in CC journals
 

1. Bozek, Jelena; Makropoulos, Antonios; Schuh, Andreas; Fitzgibbon, Sean; Wright, Robert; Glasser, Matthew F.; Coalson, Timothy S.; O'Muircheartaigh, Jonathan; Hutter, Jana; Price, Anthony N.; Cordero-Grande, Lucilio; Teixeira, Rui Pedro A.G.; Hughes, Emer; Tusor, Nora; Pegoretti Baruteau, Kelly; Rutherford, Mary A.; Edwards, A. David; Hajnal, Joseph V.; Smith, Stephen M.; Rueckert, Daniel; Jenkinson, Mark; Robinson, Emma C.
Construction of a neonatal cortical surface atlas using Multimodal Surface Matching in the Developing Human Connectome Project. // Neuroimage. 179 (2018) ; 11-29 (journal article).

2. Makropoulos, Antonios; Robinson, Emma C.; Schuh, Andreas; Wright, Robert; Fitzgibbon, Sean; Bozek, Jelena; Counsell, Serena J.; Steinweg, Johannes; Vecchiato, Katy; Passerat-Palmbach, Jonathan; Lenz, Gregor; Mortari, Filippo; Tenev, Tencho; Duff, Eugene P.; Bastiani, Matteo; Cordero-Grande, Lucilio; Hughes, Emer; Tusor, Nora; Tournier, Jacques-Donald; Hutter, Jana; Price, Anthony N.; Teixeira, Rui Pedro A.G.; Murgasova, Maria; Victor, Suresh; Kelly, Christopher; Rutherford, Mary A.; Smith, Stephen M.; Edwards, A. David; Hajnal, Joseph V.; Jenkinson, Mark; Rueckert, Daniel.
The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. // Neuroimage. 173 (2018) ; 88-112 (journal article).

3. Robinson, Emma C.; Garcia, Kara; Glasser, Matthew F.; Chen, Zhengdao; Coalson, Timothy S.; Makropoulos, Antonios; Božek, Jelena; Wright, Robert; Schuh, Andreas; Webster, Matthew; Hutter, Jana; Price, Anthony; Cordero Grande, Lucilio; Hughes, Emer; Tusor, Nora; Bayly, Philip V.; Van Essen, David C.; Smith, Stephen M.; Edwards, David; Hajnal, Joseph; Jenkinson, Mark; Glocker, Ben; Rueckert, Daniel.
Multimodal Surface Matching with Higher-Order Smoothness Constraints. // Neuroimage. 167 (2018) ; 453-465 (journal article).

4. Božek, Jelena; Kallenberg, Michiel; Grgić, Mislav; Karssemeijer, Nico.
Use of volumetric features for temporal comparison of mass lesions in full field digital mammograms. // Medical physics. 41 (2014) , 2; 021902-1-021902-8 (journal article).
 
  Published invited lectures
 

1. Božek, Jelena.
Mammographic Image Analysis // Proceedings Redžúr 2011 / Vojtko, Juraj ; Rozinaj, Gregor ; Kondelová, Anna ; Tóth, Ján ; Londák, Juraj, editor(s).
Bratislava : Nakladateľstvo STU Bratislava in cooperation with Združenie používateľov telekomunikácií Slovenska, 2011. 1-4 (invited talk,international peer-review,published,scientific).
 
  Scientific conference papers with international peer-review
 

1. Božek, Jelena; Fitzgibbon, Sean; Wright, Robert; Rueckert, Daniel; Jenkinson, Mark; Robinson, Emma C.
Construction of a Neonatal Cortical Surface Atlas Using Multimodal Surface Matching // 2016 IEEE International Symposium on Biomedical Imaging: From Nano to Macro ; Proceedings.
2016. 775-778 (poster,international peer-review,published,scientific).

2. Božek, Jelena; Kallenberg, Michiel; Grgić, Mislav; Karssemeijer, Nico.
Comparison of Lesion Size Using Area and Volume in Full Field Digital Mammograms // Breast Imaging, 11th International Workshop, IWDM 2012, LNCS 7361 / Maidment, Andrew D.A. ; Bakic, Predrag R. ; Gavenonis, Sara, editor(s).
Heidelberg : Springer, 2012. 96-103 (poster,international peer-review,published,scientific).

3. Muštra, Mario; Grgić, Mislav; Božek, Jelena.
Application of Gabor Filters for Detection of Dense Tissue in Mammograms // Proceedings of the 54th International Symposium ELMAR-2012 / Božek, Jelena ; Grgić, Mislav, editor(s).
Zagreb : Croatian Society Electronics in Marine, 2012. 67-70 (lecture,international peer-review,published,scientific).

4. Božek, Jelena; Grgić, Mislav; Schnabel, Julia A.
Validation of Rigid Registration of Mammographic Images // Proceedings of the 53rd International Symposium ELMAR-2011 / Božek, Jelena ; Grgić, Mislav, editor(s).
Zagreb : Croatian Society Electronics in Marine, 2011. 11-16 (lecture,international peer-review,published,scientific).

5. Tralić, Dijana; Božek, Jelena; Grgić, Sonja.
Shape Analysis and Classification of Masses in Mammographic Images using Neural Networks // PROCEEDINGS IWSSIP 2011 / Zovko-Cihlar, Branka ; Behlilović, Narcis ; Hadžialić, Mesud, editor(s).
Sarajevo : Faculty of Electrical Engineering, University of Sarajevo, 2011. 247-251 (lecture,international peer-review,published,scientific).

6. Božek, Jelena; Grgić, Mislav; Delač, Krešimir.
Comparative Analysis of Interpolation Methods for Bilateral Asymmetry // Proceedings of the 52nd International Symposium ELMAR-2010 / Grgić, Mislav ; Božek, Jelena ; Grgić, Sonja, editor(s).
Zagreb : Croatian Society Electronics in Marine, 2010. 1-7 (lecture,international peer-review,published,scientific).

7. Božek, Jelena; Dumić, Emil; Grgić, Mislav.
Bilateral Asymmetry Detection in Digital Mammography Using B-spline Interpolation // Proceedings of the 16th International Conference on Systems, Signals and Image Processing (IWSSIP 2009) / Karras, Dimitrios ; Voliotis, Stamatis, editor(s).
Chalkida : TEI Chalkida, 2009. CD1-CD4 (lecture,international peer-review,published,scientific).

8. Božek, Jelena; Muštra, Mario; Grgić, Mislav.
A Survey of Mammographic Image Processing Algorithms for Bilateral Asymmetry Detection // Proceedings of the 51st International Symposium ELMAR-2009 / Grgić, Mislav ; Božek, Jelena ; Grgić, Sonja, editor(s).
Zagreb : Croatian Society Electronics in Marine, 2009. 9-14 (lecture,international peer-review,published,scientific).

9. Muštra, Mario; Božek, Jelena; Grgić, Mislav.
Breast Border Extraction and Pectoral Muscle Detection Using Wavelet Decomposition // Proceedings of the International IEEE Conference EUROCON 2009 / Alexander Mikerov, editor(s).
Piscataway : IEEE, 2009. 1428-1435 (lecture,international peer-review,published,scientific).

10. Muštra, Mario; Božek, Jelena; Grgić, Mislav.
Nipple Detection in Craniocaudal Digital Mammograms // Proceedings of the 51st International Symposium ELMAR-2009 / Grgić, Mislav ; Božek, Jelena ; Grgić, Sonja, editor(s).
Zagreb : Croatian Society Electronics in Marine, 2009. 15-18 (lecture,international peer-review,published,scientific).

11. Božek, Jelena; Delač, Krešimir; Grgić, Mislav.
Computer-Aided Detection and Diagnosis of Breast Abnormalities in Digital Mammography // Proceedings of the 50th International Symposium ELMAR-2008 / Grgić, Mislav ; Grgić, Sonja, editor(s).
Zadar : Croatian society Electronics in Marine, 2008. 45-52 (lecture,international peer-review,published,scientific).
 
  Abstracts in Book of abstracts
 

1. Kesedžić, Ivan; Božek, Jelena; Radoš, Milan; Popović, Siniša; Ćosić, Krešimir.
Prefrontal cortex activation during cognitive task as a predictor of stress resilience: fMRI vs fNIRS study // 7th Croatian Neuroscience Congress.
(poster,international peer-review,abstract,scientific).

2. Ball, Gareth; Seidlitz, Jakob; Makropoulos, Antonios; Schuh, Andreas; Bozek, Jelena; Hajnal, Jo; Rueckert, Daniel; Smith, Stephen; Cordero-Grande, Lucilio; Hughes, Emer; Price, Anthony; Robinson, Emma; Edwards, A David.
The Developing Human Connectome Project: Neonatal imaging markers of spatiotemporal gene expression // .
1-5 (poster,international peer-review,scientific).

3. Bastiani, Matteo; Cottaar, Michiel; Bozek, Jelena; Robinson, Emma; Cordero-Grande, Lucilio; Hutter, Jana; Makropoulos, Antonios; Schuh, Andreas; Cupitt, John; Rueckert, Daniel; Edwards, A David; Hajnal, Jo; Smith, Stephen; Sotiropoulos, Stamatios; Jbabdi, Saad.
Modelling structural changes in the developing Human Connectome Project with connectivity blueprints // .
1-5 (poster,international peer-review,scientific).

4. O’Muircheartaigh, Jonathan; Robinson, Emma; Rutherford, Mary; Pietsch, Maximilian; Teixeira, Rui Pedro AG; Batalle, Dafnis; Bozek, Jelena; Schuh, Andreas; Makropoulos, Antonios; Hughes, Emer; Cordero-Grande, Lucilio; Price, Anthony; Smith, Stephen; HajnalJo; Rueckert, Daniel; Counsell, Serena; Edwards, A David.
Joint Modelling of Brain Tissue Intensity and Shape Across the Perinatal Period in the dHCP // .
1-6 (poster,international peer-review,scientific).

5. Thompson, Elinor; Robinson, Emma; Bozek, Jelena; Jbabdi, Saad; Bastiani, Matteo; Sotiropoulos, Stamatios.
Exploring the Gyral Bias on White Matter Tractography in Neonates // .
1-5 (poster,international peer-review).

6. Fitzgibbon, Sean P.; Andersson, Jesper; Harrison, Samuel J.; Robinson, Emma; Bozek, Jelena; Makropoulos, Antonios; Bastiani, Matteo; Griffanti, Ludovica; Wright, Robert; Schuh, Andreas; Hughes, Emer; O'Muircheartaigh, Jonathan; Dos Santos Gomes, Ana; Allsop, Joanna; Steinweg, Johannes; Tusor, Nora; Wurie, Julia; Bueno-Conde, Jose; Abaei, Maryam; Price, Anthony; Cordero Grande, Lucillio; Hutter, Jana; Beckmann, Christian F.; Hajnal, Jo V.; Rueckert, Daniel; Edwards, David; Smith, Stephen; Jenkinson, Mark; Duff, Eugene P.
The developing Human Connectome Project automated functional processing framework for neonates // .
(poster,international peer-review,scientific).

7. Fitzgibbon, Sean; Andersson, Jesper; Harrison, Samuel; Robinson, Emma; Bozek, Jelena; Makropoulos, Antonios; Bastiani, Matteo; Griffanti, Ludovica; Wright, Robert; Schuh, Andreas; Hughes, Emer; O'Muircheartaigh, Jonathan; Gomes, Ana; Allsop, Joanna; Steinweg, Johannes; Tusor, Nora; Wurie, Julia; Bueno-Conde, Jose; Abaei, Maryam; Price, Anthony; Cordero-Grande, Lucilio; Hutter, Jana; Beckmann, Christian; Hajnal, Joseph; Rueckert, Daniel; Edwards, David; Smith, Stephen; Jenkinson, Mark; Duff, Eugene.
The developing Human Connectome Project automated functional pre-processing pipeline for neonates // .
(poster,international peer-review,abstract,scientific).

8. Hughes, Emer; Cordero-Grande, Lucilio; Murgasova, Maria; Hutter, Jana; Price, Anthony; Dos Santos Gomes, Ana; Allsop, Joanna; Steinweg, Johannes; Tusor, Nora; Wurie, Julia; Bueno-Conde, Jose; Tournier, Jacques-Donald; Abaei, Maryam; Counsell, Serena; Rutherford, Mary; Pietsch, Maximillian; Edwards, David; Hajnal, Joseph; Fitzgibbon, Sean; Duff, Eugene; Bastiani, Matteo; Andersson, Jesper; Jbabdi, Saad; Sotiropoulos, Stamatios; Jenkinson, Mark; Smith, Stephen; Harrison, Samuel; Griffanti, Ludovica; Wright, Robert; Bozek, Jelena; Beckmann, Christian; Makropoulos, Antonios; Robinson, Emma; Schuh, Andreas; Passerat-Palmbach, Jonathan; Lenz, Gregor; Mortari, Filippo; Tenev, Tencho; Rueckert, Daniel.
The Developing Human Connectome: announcing the first release of open access neonatal brain imaging // .
(poster,international peer-review,abstract,scientific).

9. Kesedžić, Ivan; Božek, Jelena; Radoš, Milan; Radoš, Marko; Sedmak, Goran; Ščuri, Ivana; Mijan Vranješ, Neda; Jurišić, Fran; Popović, Siniša; Ćosić, Krešimir; Kostović, Ivica.
Analysis of soldiers' cognitive performance during Stroop test: An fMRI study // The 6th Croatian Neuroscience Congress with international participation: Book of abstracts.
2017. 72-72 (poster,international peer-review,abstract,scientific).

10. Fitzgibbon, Sean P.; Jenkinson, Mark; Robinson, Emma; Bozek, Jelena; Griffanti, Ludovica; Makropoulos, Antonious; Wright, Robert; Schuh, Andreas; Hughes, Emer; Abaei, Maryam; Price, Anthony; Cordero Grande, Lucilio; Hutter, Jana; Tusor, Nora; Beckmann, Christian F.; Hajnal, Joseph V.; Rueckert, Daniel; Edwards, David A.; Smith, Stephen; Duff, Eugene P.
The developing Human Connectome Project (dHCP): minimal functional pre-processing pipeline for neonates // .
(poster,international peer-review,abstract,scientific).

11. Bozek, Jelena; Bastiani, Matteo; Makropoulos, Antonios; Wright, Robert; Schuh, Andreas; Fitzgibbon, Sean; Hutter, Jana; Price, Anthony; Cordero Grande, Lucilio; Hughes, Emer; Tusor, Nora; Edwards, A David; Hajnal, Joseph; Smith, Stephen; Rueckert, Daniel; Jenkinson, Mark; Robinson, Emma.
In Vivo Cortical Myelination of the Neonatal Brain in the Developing Human Connectome Project // .
(poster,international peer-review,abstract,scientific).

12. Robinson, Emma; Fitzgibbon, Sean; Bozek, Jelena; Makropoulos, Antonios; Wright, Robert; Schuh, Andreas; Hutter, Jana; Price, Anthony; Cordero Grande, Lucilio; Hughes, Emer; Tusor, Nora; Edwards, A David; Hajnal, Joseph; Smith, Stephen; Jenkinson, Mark; Rueckert, Daniel; Duff, Eugene.
First thoughts: Quantifying development of neonatal brain function // .
(poster,international peer-review,abstract,scientific).

13. Robinson, Emma; Glocker, Ben; Garcia, Kara; Makropoulos, Antonios; Bozek, Jelena; Fitzgibbon, Sean; Wright, Robert; Schuh, Andreas; Hutter, Jana; Price, Anthony; Cordero Grande, Lucilio; Hughes, Emer; Tusor, Nora; Edwards, A David; Hajnal, Joseph; Jenkinson, Mark; Rueckert, Daniel.
Longitudinal Alignment of Brain Cortical Anatomy using Strain-Constrained MSM // .
(poster,international peer-review,abstract,scientific).

14. Božek, Jelena.
Mammographic Image Analysis - Directions for Future Research during PhD Study // Book of Abstracts - KDSA 2008, Workshop on Knowledge Discovery in Scientific Applications / Gamberger, Dragan, editor(s).
Zagreb : IRB, 2008. (lecture,abstract,scientific).
 
  Unpublished papers
 

1. Bojić, Iva; Božek Jelena; Petrić, Ana; Podobnik, Vedran.
How to write a scientific paper and present it on ELMAR conference // IEEE Croatia Section Student Activities Lecture Series.
IEEE Croatia Section & University of Zagreb Faculty of Electrical Engineering and Computing, 2012. (invited talk,ppt presentation,expert).

2. Božek, Jelena.
Medical Image Analysis at the Video Communications Laboratory // First Croatian Computer Vision Workshop - Abstract Book / Lončarić, Sven, editor(s).
Zagreb : FER, 2012. (lecture,ppt presentation,scientific).

3. Božek, Jelena; Grgić, Mislav.
Registration of Mammographic Images for Bilateral Asymmetry Detection // .
(poster,unpublished,scientific).
 
  Dissertations
 

1. Božek, Jelena.
Bilateral Mammogram Registration and Temporal Analysis of Lesions in Digital Mammograms / doctoral thesis.
Zagreb : Fakultet elektrotehnike i računarstva, 5.6. 2013., 129 pages. Mentor: Grgić, Mislav.
 

Teaching duties

University undergraduate

University graduate

Competences

  • Engineering in medicine and biology
    Biomedical image processing Biomedical imaging
  • Imaging
    Magnetic resonance imaging
  • Engineering in medicine and biology
    Biomedical image processing Biomedical imaging

Personal data

Graduation year:
2008.
PhD graduation year:
2013.
Employed in this institution since:
2008.